CMD - Cotton Marker Database
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 Marker Source Sequence

Marker Name : CIR043
Motif(s) and Frequency : (T)16+(TG)9
ORF Position : 85 - 387
Sequence Type : Genomic
Forward Primer : CAGGGCTTCTTTATTATGT
Reverse Primer : GGTGAAGTGGTTTCTCTC
Complementary of
Reverse Primer
: GAGAGAAACCACTTCACC
CAGGTCCTGATGCCATTGGAATGTCTACTGCTAATAGCTTCATATCATAC
TGCAAACAAGAATAACAAATGCTCTGATATATAGGAATGGGCTAAAATAC
TAAGAAAACTTCATGCTATTTCACTTTTATCCCATTCAATTAAGCCTTTA
TTCTTTGATTTGAACCCAAATAGGTCCTTTATCCTATTCAATT
CAGGGCT
TCTTTATTATGT
TAAGTCACAGGGATATATCATAACTACCACTATAATAG
CATTTATGCATTTTGTACTCTTCCATTTTATTCCTGTTTTTTTTTTTTTT
TTGTGTGTGTGTGTGTGTGATTTGGGCTGGCGGGGAATGCTCAAGGTACA
TGCCACAAGGAAACAAAAGGGAGCCAGGGTACTATAA
GAGAAACGATTTC
ATATGTTTCCAGGAAATGTTCAAGACGTTAAACTATTTCATTTACTGAAG
AATGACAGAGAGAAACCACTTCACCAGCTCCCTCTCTATCATTAATCAGT
NAAAGAGAAAAGGATC
KEY :   = ORF,   = Primer (highlighted only if exact match to sequence)
ROW LENGTH : 50
  Related Information
for CIR043


  • Project Page
  • Homology
  • Publications
  • Genbank Record
  • CottonDB Record
  • Primer Redundancy
  • Trait
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