CMD - Cotton Marker Database
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 Marker Source Sequence

Marker Name : BNL3556
Motif(s) and Frequency : (AC)12(AT)4
ORF Position : 52 - 258
Sequence Type : Genomic
Forward Primer : CCTTTCATGACCCTGCAAAT
Reverse Primer : AGATGGGGAATGGATCTGTG
Complementary of
Reverse Primer
: CACAGATCCATTCCCCATCT
TCGATGAAGTAATCATAATATAGTAAATGTTTTTATTAATTGAATCATTG
ATCATGATTGACATTTGACCTTGATGGTAAGACAAATTAGCCTTTCATGA
CCCTGCAAAT
AACCCACAAATACACACACACACACACACACACACATATA
TATGTATAACTGTAATTCGTAGCCTATGTTAACTACAAATGCATTAGGAA
TAGGCTCAA
CACAGATCCATTCCCCATCTTTTAAGACCTGAAGGCCACTT
ATATGTCC
TTAAAGTAGGATGGTTAAGAGATCAGGGTCAAAATATGTAGG
AATTCCTAGAGTTAAACTTGGTTCAGGGCATGGTGGATAATGGTTAGCCC
CTAGTTGCTGATCTTTGGTTAGTTCCTGTTCAAAGTACCCGTGTTAGATG
CCTATGCCTTCACAAAGCAACTCAAGGATTCTTAGTCCTAATTTCTTTGC
TTCAATTTGATATGTTGCTACTACCTCTCTGCAAAGTTATTATTAAGTCA
TTAGGCCAACGATAAACCTGAAGCAGCTCAAAAATCGGTTTTNAGGCATA
TAAATACCAGTAACCGGGGGGACTTTCGA
KEY :   = ORF,   = Primer (highlighted only if exact match to sequence)
ROW LENGTH : 50
  Related Information
for BNL3556


  • Project Page
  • Homology
  • Publications
  • Genbank Record
  • CottonDB Record
  • Primer Redundancy
  • Trait
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