CMD - Cotton Marker Database
Home | Contact Us | About Us    
 General info   View Search Resources

 Marker Source Sequence

Marker Name : CIR328
Motif(s) and Frequency : (CA)5
ORF Position : 167 - 400
Sequence Type : Genomic
Forward Primer : ATCCCTATGCTTGTCATC
Reverse Primer : ATTACCATTCATTCACCAC
Complementary of
Reverse Primer
: GTGGTGAATGAATGGTAAT
CGAGTTGACGTATGCGCCGTTCCGAGAGGAAAGCATTAAAGTAGATGGTA
TAGGTGATATACTTTCCAGGAAGGAAAGCAGTCAAGACAGACCCTCTGAG
AATAGTAGTGAGTGTGTTAAGTGGAGCAGGTTTTGCTTTCGGTTACGTGT
TCAAGGAGCCGAGTGATGTTTGAAGTGTCTACGCCACAATAATCCCTATG
CTTGTCATC
CGATTCCGAGGGCTGACAAAAAGAAGACTAAGTGTGCATTT
CTTTCTTCTTTATTTACTTATTGTTTTGTATATGTGGTAAGTAGGTTATT
GGGATGGTTGGATATATATTCTTTTAGTTTAGTTGAACACAAACACACAC
ACAGAGTTATGTATAATCCAATCATTTCTGAG
GTGGTGAATGAATGGTAA
T
TTCAGAAAATAAAGAACAACACGACATCCGCTTGTGTGAATGAAGAGTT
CCAATTTATGCTGGAGTGAGCCTCCTTTAAATGACACCATTCG
KEY :   = ORF,   = Primer (highlighted only if exact match to sequence)
ROW LENGTH : 50
  Related Information
for CIR328


  • Project Page
  • Homology
  • Publications
  • Genbank Record
  • CottonDB Record
  • Primer Redundancy
  • Associated Trait
  •  

    © 2005-2010 | Clemson University | Disclaimer | Comments or Questions