CMD - Cotton Marker Database
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 Marker Source Sequence

Marker Name : TMB0517
Motif(s) and Frequency : (GA)5+(GA)9
ORF Position : 408 - 773
Sequence Type : Genomic
Forward Primer : AACCACAACCAAAATTTCACG
Reverse Primer : CTTGGCTTTGGTTTCGTAGG
Complementary of
Reverse Primer
: CCTACGAAACCAAAGCCAAG
GGATCTAATTCTTGTAAATTATTAACATAGTTATTGATATAGCAATATTT
TATATTTATATATTGCATAAAAAATAATTATATTTATCAAATATATAAAA
AAATCGATATATTCATTTAATTAAAAATGTATAATTGAATCAAAATTGAA
GTTTCATGTATATAATTGAACCACAACCAAAATTTCACGTATATAATTGT
ACTAAATCAAAATTTATGAATCAAATGAGAGAGAGAGCAACAACAAAATA
ATATAAAGAGCATTAGAGAGAGAGAGAGAGAGAGCAACAACAAAATAATA
TAAAGAGCATTCCCCACCAAGCCCTACGAAACCAAAGCCAAGATCAACTA
ACTCTAGGTTGATTAATTAAAATTTCTTTCTAATTAAAACCTCTATTATT
GCATTAATTTGCTTTATGGATCAGTTCCCTTATTAGGTCCAAAGATATAC
ATTCTGCCATTGAATTGATGAATGAGATGGAGAGAAAGCAGATTGAGTAT
GATGGTGTGACGTATCATACAATGTTTTTAGGGATGATGAAGTTGAGTGG
CATTGAAGGAGTTAGCGAGCTTTACTGTAAAATGCTCGAGAGAAATTTCA
TTCCTAGGACCCGGACAGTGGTGATGCTAATGAAATTTTTTTGTGGAAAC
CAGCATTTGCATTTTGCTTTAAATTTATGGGATTATTTATTACAGAAAGG
GCATTGTCCTCATAGCCATGCACTGGATCATCAATATTTAATTCTCTACC
ATAAGCCTGGCATTTTTTCGAAA
T
KEY :   = ORF,   = Primer (highlighted only if exact match to sequence)
ROW LENGTH : 50
  Related Information
for TMB0517


  • Project Page
  • Homology
  • Publications
  • Genbank Record
  • CottonDB Record
  • Primer Redundancy
  • Trait
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